Index

_

__add__() (pyUSID.io.dimension.Dimension method) __array__() (pyUSID.io.usi_data.USIDataset method) __bytes_per_pos (pyUSID.processing.process.Process.self attribute) __compute_jobs (pyUSID.processing.process.Process.self attribute) __end_pos (pyUSID.processing.process.Process.self attribute) __getitem__() (pyUSID.io.usi_data.USIDataset method) __getnewargs__() (pyUSID.io.usi_data.USIDataset method) __iter__() (pyUSID.io.usi_data.USIDataset method) __len__() (pyUSID.io.usi_data.USIDataset method) __mul__() (pyUSID.io.dimension.Dimension method) __new__() (pyUSID.io.dimension.Dimension static method)

__pixels_in_batch (pyUSID.processing.process.Process.self attribute) __rank_end_pos (pyUSID.processing.process.Process.self attribute) __ranks_on_socket (pyUSID.processing.process.Process.self attribute) __resume_implemented (pyUSID.processing.process.Process.self attribute) __setitem__() (pyUSID.io.usi_data.USIDataset method) __socket_master_rank (pyUSID.processing.process.Process.self attribute) __start_pos (pyUSID.processing.process.Process.self attribute) _cores (pyUSID.processing.process.Process.self attribute) _h5_target_group (pyUSID.processing.process.Process.self attribute) _max_pos_per_read (pyUSID.processing.process.Process.self attribute) _results (pyUSID.processing.process.Process.self attribute) _status_dset_name (pyUSID.processing.process.Process.self attribute)

A

ALIGNED (pyUSID.io.dimension.Dimension attribute) all() (pyUSID.io.dimension.Dimension method) any() (pyUSID.io.dimension.Dimension method) argmax() (pyUSID.io.dimension.Dimension method) argmin() (pyUSID.io.dimension.Dimension method) argpartition() (pyUSID.io.dimension.Dimension method)

argsort() (pyUSID.io.dimension.Dimension method) ArrayTranslator (class in pyUSID.io.array_translator) assign_group_index() (in module pyUSID.io.hdf_utils.simple) asstr() (pyUSID.io.usi_data.USIDataset method) astype() (pyUSID.io.dimension.Dimension method) (pyUSID.io.usi_data.USIDataset method) attrs (pyUSID.io.usi_data.USIDataset property)

B

base (pyUSID.io.dimension.Dimension attribute) BEHAVED (pyUSID.io.dimension.Dimension attribute)

build_ind_val_matrices() (in module pyUSID.io.anc_build_utils) byteswap() (pyUSID.io.dimension.Dimension method)

C

C_CONTIGUOUS (pyUSID.io.dimension.Dimension attribute) calc_chunks() (in module pyUSID.io.anc_build_utils) CARRAY (pyUSID.io.dimension.Dimension attribute) check_and_link_ancillary() (in module pyUSID.io.hdf_utils.simple) check_for_matching_attrs() (in module pyUSID.io.hdf_utils.simple) check_for_old() (in module pyUSID.io.hdf_utils.simple) check_if_main() (in module pyUSID.io.hdf_utils.simple) choose() (pyUSID.io.dimension.Dimension method) chunks (pyUSID.io.usi_data.USIDataset property) clip() (pyUSID.io.dimension.Dimension method) compress() (pyUSID.io.dimension.Dimension method) compression (pyUSID.io.usi_data.USIDataset property) compression_opts (pyUSID.io.usi_data.USIDataset property)

compute() (pyUSID.processing.process.Process method) conj() (pyUSID.io.dimension.Dimension method) conjugate() (pyUSID.io.dimension.Dimension method) copy() (pyUSID.io.dimension.Dimension method) copy_main_attributes() (in module pyUSID.io.hdf_utils.simple) copy_region_refs() (in module pyUSID.io.reg_ref) create_empty_dataset() (in module pyUSID.io.hdf_utils.simple) create_indexed_group() (in module pyUSID.io.hdf_utils.simple) create_results_group() (in module pyUSID.io.hdf_utils.simple) create_spec_inds_from_vals() (in module pyUSID.io.anc_build_utils) ctypes (pyUSID.io.dimension.Dimension attribute) cumprod() (pyUSID.io.dimension.Dimension method) cumsum() (pyUSID.io.dimension.Dimension method)

D

data (pyUSID.io.dimension.Dimension attribute) diagonal() (pyUSID.io.dimension.Dimension method) Dimension (class in pyUSID.io.dimension) dims (pyUSID.io.usi_data.USIDataset property) DimType (class in pyUSID.io.dimension)

dtype (pyUSID.io.dimension.Dimension attribute) (pyUSID.io.usi_data.USIDataset property) dump() (pyUSID.io.dimension.Dimension method) dumps() (pyUSID.io.dimension.Dimension method) duplicate_h5_groups (pyUSID.processing.process.Process.self attribute)

E

external (pyUSID.io.usi_data.USIDataset property)

F

F_CONTIGUOUS (pyUSID.io.dimension.Dimension attribute) FARRAY (pyUSID.io.dimension.Dimension attribute) fields() (pyUSID.io.usi_data.USIDataset method) file (pyUSID.io.usi_data.USIDataset property) fill() (pyUSID.io.dimension.Dimension method) fillvalue (pyUSID.io.usi_data.USIDataset property) find_dataset() (in module pyUSID.io.hdf_utils.simple)

find_results_groups() (in module pyUSID.io.hdf_utils.simple) flags (pyUSID.io.dimension.Dimension attribute) flat (pyUSID.io.dimension.Dimension attribute) flatten() (pyUSID.io.dimension.Dimension method) fletcher32 (pyUSID.io.usi_data.USIDataset property) flush() (pyUSID.io.usi_data.USIDataset method) FNC (pyUSID.io.dimension.Dimension attribute) FORC (pyUSID.io.dimension.Dimension attribute)

G

get_all_main() (in module pyUSID.io.hdf_utils.simple) get_aux_dset_slicing() (in module pyUSID.io.anc_build_utils) get_available_memory() (in module pyUSID.processing.comp_utils) get_current_sorting() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method) get_dimensionality() (in module pyUSID.io.hdf_utils.model) get_h5_obj_refs() (in module pyUSID.io.hdf_utils.base) get_MPI() (in module pyUSID.processing.comp_utils) get_n_dim_form() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method)

get_pos_values() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method) get_sort_order() (in module pyUSID.io.hdf_utils.model) get_source_dataset() (in module pyUSID.io.hdf_utils.simple) get_spec_values() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method) get_unit_values() (in module pyUSID.io.hdf_utils.model) getfield() (pyUSID.io.dimension.Dimension method) group_ranks_by_socket() (in module pyUSID.processing.comp_utils)

H

h5_pos_inds (pyUSID.io.usi_data.USIDataset.self attribute) h5_pos_vals (pyUSID.io.usi_data.USIDataset.self attribute)

h5_results_grp (pyUSID.processing.process.Process.self attribute) h5_spec_inds (pyUSID.io.usi_data.USIDataset.self attribute) h5_spec_vals (pyUSID.io.usi_data.USIDataset.self attribute)

I

id (pyUSID.io.usi_data.USIDataset property) imag (pyUSID.io.dimension.Dimension attribute) ImageTranslator (class in pyUSID.io.image) is_scale (pyUSID.io.usi_data.USIDataset property) is_valid_file() (pyUSID.io.array_translator.ArrayTranslator static method) (pyUSID.io.image.ImageTranslator static method)

is_virtual (pyUSID.io.usi_data.USIDataset property) item() (pyUSID.io.dimension.Dimension method) itemsize (pyUSID.io.dimension.Dimension attribute) iter_chunks() (pyUSID.io.usi_data.USIDataset method)

L

len() (pyUSID.io.usi_data.USIDataset method)

link_as_main() (in module pyUSID.io.hdf_utils.simple)

M

make_indices_matrix() (in module pyUSID.io.anc_build_utils) make_scale() (pyUSID.io.usi_data.USIDataset method) map_grid_to_cartesian() (in module pyUSID.io.hdf_utils.model) max() (pyUSID.io.dimension.Dimension method) maxshape (pyUSID.io.usi_data.USIDataset property) mean() (pyUSID.io.dimension.Dimension method) min() (pyUSID.io.dimension.Dimension method) module pyUSID pyUSID.io pyUSID.io.anc_build_utils, [1] pyUSID.io.array_translator, [1] pyUSID.io.dimension, [1] pyUSID.io.hdf_utils, [1] pyUSID.io.hdf_utils.base, [1], [2] pyUSID.io.hdf_utils.model, [1], [2] pyUSID.io.hdf_utils.simple, [1], [2] pyUSID.io.image, [1] pyUSID.io.reg_ref pyUSID.io.usi_data, [1] pyUSID.processing pyUSID.processing.comp_utils pyUSID.processing.process

mpi_comm (pyUSID.processing.process.Process.self attribute) mpi_rank (pyUSID.processing.process.Process.self attribute) mpi_size (pyUSID.processing.process.Process.self attribute) mT (pyUSID.io.dimension.Dimension attribute)

N

n_dim_labels (pyUSID.io.usi_data.USIDataset.self attribute) n_dim_sizes (pyUSID.io.usi_data.USIDataset.self attribute) name (pyUSID.io.usi_data.USIDataset property) nbytes (pyUSID.io.dimension.Dimension attribute) (pyUSID.io.usi_data.USIDataset property)

ndim (pyUSID.io.dimension.Dimension attribute) (pyUSID.io.usi_data.USIDataset property) nonzero() (pyUSID.io.dimension.Dimension method)

O

OWNDATA (pyUSID.io.dimension.Dimension attribute)

P

parallel_compute() (in module pyUSID.processing.comp_utils) parent (pyUSID.io.usi_data.USIDataset property) parms_dict (pyUSID.processing.process.Process attribute) (pyUSID.processing.process.Process.self attribute) partial_h5_groups (pyUSID.processing.process.Process.self attribute) partition() (pyUSID.io.dimension.Dimension method) pos_dim_labels (pyUSID.io.usi_data.USIDataset.self attribute) pos_dim_sizes (pyUSID.io.usi_data.USIDataset.self attribute) print_tree() (in module pyUSID.io.hdf_utils.base) Process (class in pyUSID.processing.process) process_name (pyUSID.processing.process.Process.self attribute) prod() (pyUSID.io.dimension.Dimension method) put() (pyUSID.io.dimension.Dimension method) pyUSID module pyUSID.io module pyUSID.io.anc_build_utils module, [1] pyUSID.io.array_translator module, [1]

pyUSID.io.dimension module, [1] pyUSID.io.hdf_utils module, [1] pyUSID.io.hdf_utils.base module, [1], [2] pyUSID.io.hdf_utils.model module, [1], [2] pyUSID.io.hdf_utils.simple module, [1], [2] pyUSID.io.image module, [1] pyUSID.io.reg_ref module pyUSID.io.usi_data module, [1] pyUSID.processing module pyUSID.processing.comp_utils module pyUSID.processing.process module

R

ravel() (pyUSID.io.dimension.Dimension method) read_direct() (pyUSID.io.usi_data.USIDataset method) read_image() (in module pyUSID.io.image) real (pyUSID.io.dimension.Dimension attribute) recommend_cpu_cores() (in module pyUSID.processing.comp_utils) reduce() (pyUSID.io.usi_data.USIDataset method) ref (pyUSID.io.usi_data.USIDataset property) refresh() (pyUSID.io.usi_data.USIDataset method)

regionref (pyUSID.io.usi_data.USIDataset property) repeat() (pyUSID.io.dimension.Dimension method) reshape() (pyUSID.io.dimension.Dimension method) reshape_from_n_dims() (in module pyUSID.io.hdf_utils.model) reshape_to_n_dims() (in module pyUSID.io.hdf_utils.model) resize() (pyUSID.io.dimension.Dimension method) (pyUSID.io.usi_data.USIDataset method) round() (pyUSID.io.dimension.Dimension method)

S

scaleoffset (pyUSID.io.usi_data.USIDataset property) searchsorted() (pyUSID.io.dimension.Dimension method) setfield() (pyUSID.io.dimension.Dimension method) setflags() (pyUSID.io.dimension.Dimension method) shape (pyUSID.io.dimension.Dimension attribute) (pyUSID.io.usi_data.USIDataset property) shuffle (pyUSID.io.usi_data.USIDataset property) size (pyUSID.io.dimension.Dimension attribute) (pyUSID.io.usi_data.USIDataset property) slice() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method)

slice_to_dataset() (pyUSID.io.usi_data.USIDataset method) sort() (pyUSID.io.dimension.Dimension method) spec_dim_labels (pyUSID.io.usi_data.USIDataset.self attribute) spec_dim_sizes (pyUSID.io.usi_data.USIDataset.self attribute) squeeze() (pyUSID.io.dimension.Dimension method) std() (pyUSID.io.dimension.Dimension method) strides (pyUSID.io.dimension.Dimension attribute) sum() (pyUSID.io.dimension.Dimension method) swapaxes() (pyUSID.io.dimension.Dimension method)

T

T (pyUSID.io.dimension.Dimension attribute) take() (pyUSID.io.dimension.Dimension method) test() (pyUSID.processing.process.Process method) to_csv() (pyUSID.io.usi_data.USIDataset method) tobytes() (pyUSID.io.dimension.Dimension method) tofile() (pyUSID.io.dimension.Dimension method) toggle_sorting() (pyUSID.io.usi_data.USIDataset method) (pyUSID.io.usi_data.USIDataset.self method)

tolist() (pyUSID.io.dimension.Dimension method) tostring() (pyUSID.io.dimension.Dimension method) trace() (pyUSID.io.dimension.Dimension method) translate() (pyUSID.io.array_translator.ArrayTranslator method) (pyUSID.io.image.ImageTranslator method) transpose() (pyUSID.io.dimension.Dimension method)

U

use_partial_computation() (pyUSID.processing.process.Process method)

USIDataset (class in pyUSID.io.usi_data)

V

validate_anc_dset_attrs() (in module pyUSID.io.hdf_utils.simple) validate_anc_h5_dsets() (in module pyUSID.io.hdf_utils.simple) validate_dimensions() (in module pyUSID.io.dimension) validate_dims_against_main() (in module pyUSID.io.hdf_utils.simple) validate_main_dset() (in module pyUSID.io.hdf_utils.simple)

var() (pyUSID.io.dimension.Dimension method) verbose (pyUSID.processing.process.Process.self attribute) view() (pyUSID.io.dimension.Dimension method) virtual_sources() (pyUSID.io.usi_data.USIDataset method) visualize() (pyUSID.io.usi_data.USIDataset method)

W

write_book_keeping_attrs() (in module pyUSID.io.hdf_utils.base) write_direct() (pyUSID.io.usi_data.USIDataset method) write_ind_val_dsets() (in module pyUSID.io.hdf_utils.simple) write_main_dataset() (in module pyUSID.io.hdf_utils.model)

write_reduced_anc_dsets() (in module pyUSID.io.hdf_utils.simple) write_sidpy_dataset() (in module pyUSID.io.hdf_utils.model) WRITEABLE (pyUSID.io.dimension.Dimension attribute) WRITEBACKIFCOPY (pyUSID.io.dimension.Dimension attribute)