SciFiReaders.readers.microscopy.em.tem.nion_reader.NionReader

class SciFiReaders.readers.microscopy.em.tem.nion_reader.NionReader(file_path, verbose=False)

Bases: Reader

Reader for Nion ndata and h5 files

Parameter:

file_path: str

filepath to Nion file.

Return:

datasets: dict

dictionary of sidpy datasets

param file_path:

Path to the file that needs to be read

type file_path:

str

self._input_file_path

Path to the file that will be read

Type:

str

Notes

• This method will check to make sure that the provided file_path is indeed a string and a valid file path.

• Consider calling can_read() within __init__() for validating the provided file

raises FileNotFoundError:

Methods

can_read
extract_crucial_metadata	Read essential parameter from original_metadata originating from a Nion file
get_dimensions
get_filename
get_raw
get_tags
read
set_data_type

Attributes

data
filename
tags

extract_crucial_metadata(dataset_index)

Read essential parameter from original_metadata originating from a Nion file