Available Readers

Each reader is a sidpy.Reader subclass. Import it from the package and call .read():

import SciFiReaders as sr
dataset = sr.NanonisSXMReader('scan.sxm').read()

Please get in touch if you would like to contribute a reader. See Creating a Reader for how.

Electron microscopy

Instrument / format	Extensions	Reader
Gatan DigitalMicrograph	.dm3, .dm4	DMReader, DM3Reader
Nion Swift	.ndata, .h5	NionReader
Thermo Fisher / FEI Velox	.emd	EMDReader
MRC (4D-STEM, Velox export)	.mrc	MRCReader
EDAX EDS	.h5	EDAXReader
Bruker EDS	.rto	BrukerReader

Scanning probe microscopy: AFM

Instrument / format	Extensions	Reader
Asylum Research (HDF5 export)	.h5	ARhdf5Reader
Asylum Research / Igor binary wave	.ibw	IgorIBWReader, IgorMatrixReader
Bruker Nano / NanoScope	vendor files, no fixed extension	BrukerAFMReader
Gwyddion	.gwy, .gsf	GwyddionReader
NT-MDT	.mdt	MDTReader
Nanosurf	.nid	NanoSurfNIDReader
Quantum Design FusionScope	.fsexp	FSexpReader
WSxM	.top, .stp, .cur, .gsi, .mpp	WSxM1DReader, WSxM2DReader, WSxM3DReader
Molecular Vista PiFM	.txt, .int	PiFMReader
Anfatec AXZ	.axz	AxzReader

Scanning probe microscopy: STM

Instrument / format	Extensions	Reader
Nanonis scan	.sxm	NanonisSXMReader
Nanonis spectroscopy	.dat	NanonisDatReader
Nanonis grid spectroscopy	.3ds	Nanonis3dsReader
Omicron	.asc	AscReader

Optical microscopy and spectroscopy

Instrument / format	Extensions	Reader
Zeiss confocal	.czi	CZIReader
Princeton Instruments (Raman)	.spe	RamanSpeReader

Generic and pycroscopy formats

Format	Extensions	Reader
Images	.png, .jpg, .tif, .tiff, .bmp	ImageReader
NSID (N-dimensional spectral imaging data)	.h5	NSIDReader, NSIDWriter
USID (Universal spectral imaging data)	.h5	Usid_reader
HyperSpy signals (conversion, not a file reader)	—	convert_hyperspy