SciFiReaders.readers.microscopy.em.tem.emd_reader.EMDReader¶
- class SciFiReaders.readers.microscopy.em.tem.emd_reader.EMDReader(file_path)[source]¶
Bases:
sidpy.sid.reader.ReaderCreates an instance of EMDReader which can read one or more HDF5 datasets formatted in the FEI Velox style EDM file
We can read Images, and SpectrumStreams (SpectrumImages and Spectra). Please note that all original metadata are retained in each sidpy dataset.
- Parameters
file_path (str) – Path to a HDF5 file
Methods
Checks whether or not this Reader can read the provided file
closeget_dataget_edsget_eds_spectrumget_imageget_metadataReads all available datasets in FEI Velox style hdf5 files with .edm
- can_read()[source]¶
Checks whether or not this Reader can read the provided file
- Returns
True if this Reader can read the provided file Else, False
- Return type
- read(eds_stream=False)[source]¶
Reads all available datasets in FEI Velox style hdf5 files with .edm
- Parameters
eds_stream (boolean) – switch to return spectrum image (default - False) or original spectrum stream (True)
- Returns
datasets – Datasets present in the provided file
- Return type
list of sidpy.Dataset objects